Error during EPW calculation for MgB2
Posted: Sat Jul 11, 2020 8:36 am
Dear Developer of EPW,
I was trying to calculate the electron-phonon coupling constant for MgB2 but I got a warning and error during the calculations of EPW. However, in all cases I used same nodes in scf, nscf and epw calculations (srun -n 24 epw.x -npool 24 -inp epw.in | tee epw.out). Below are the details of output and errors during epw calculations:
``:oss/
`.+s+. .+ys--yh+ `./ss+.
-sh//yy+` +yy +yy -+h+-oyy
-yh- .oyy/.-sh. .syo-.:sy- /yh
`.-.` `yh+ -oyyyo. `/syys: oys `.`
`/+ssys+-` `sh+ ` oys` .:osyo`
-yh- ./syyooyo` .sys+/oyo--yh/
`yy+ .-:-. `-/+/:` -sh-
/yh. oys
``..---hho---------` .---------..` `.-----.` -hd+---.
`./osmNMMMMMMMMMMMMMMMs. +NNMMMMMMMMNNmh+. yNMMMMMNm- oNMMMMMNmo++:`
+sy--/sdMMMhyyyyyyyNMMh- .oyNMMmyyyyyhNMMm+` -yMMMdyyo:` .oyyNMMNhs+syy`
-yy/ /MMM+.`-+/``mMMy- `mMMh:`````.dMMN:` `MMMy-`-dhhy```mMMy:``+hs
-yy+` /MMMo:-mMM+`-oo/. mMMh: `dMMN/` dMMm:`dMMMMy..MMMo-.+yo`
.sys`/MMMMNNMMMs- mMMmyooooymMMNo: oMMM/sMMMMMM++MMN//oh:
`sh+/MMMhyyMMMs- `-` mMMMMMMMMMNmy+-` -MMMhMMMsmMMmdMMd/yy+
`-/+++oyy-/MMM+.`/hh/.`mNm:` mMMd+/////:-.` NMMMMMd/:NMMMMMy:/yyo/:.`
+os+//:-..-oMMMo:--:::-/MMMo. .-mMMd+---` hMMMMN+. oMMMMMo. `-+osyso:`
syo `mNMMMMMNNNNNNNNMMMo.oNNMMMMMNNNN:` +MMMMs:` dMMMN/` ``:syo
/yh` :syyyyyyyyyyyyyyyy+.`+syyyyyyyyo:` .oyys:` .oyys:` +yh
-yh- ```````````````` ````````` `` `` oys
-+h/------------------------::::::::://////++++++++++++++++++++++///////::::/yd:
shdddddddddddddddddddddddddddddhhhhhhhhyyyyyssssssssssssssssyyyyyyyhhhhhhhddddh`
S. Ponce, E. R. Margine, C. Verdi, and F. Giustino,
Comput. Phys. Commun. 209, 116 (2016)
Program EPW v.5.1.0 starts on 11Jul2020 at 10:28:51
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
"P. Giannozzi et al., J. Phys.:Condens. Matter 29 465901 (2017);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote
Parallel version (MPI & OpenMP), running on 24 processor cores
Number of MPI processes: 24
Threads/MPI process: 1
MPI processes distributed on 2 nodes
K-points division: npool = 24
Reading data from directory:
./MgB2.save/
IMPORTANT: XC functional enforced from input :
Exchange-correlation = PZ ( 1 1 0 0 0 0)
Using LIBXC version = 4 3 4
Any further DFT definition will be discarded
Please, verify this is what you really want
G-vector sticks info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Sum 379 379 163 6657 6657 1907
--
bravais-lattice index = 4
lattice parameter (a_0) = 5.8260 a.u.
unit-cell volume = 195.5871 (a.u.)^3
number of atoms/cell = 3
number of atomic types = 2
kinetic-energy cut-off = 40.0000 Ry
charge density cut-off = 160.0000 Ry
Exchange-correlation = PZ ( 1 1 0 0 0 0)
Using LIBXC version = 4 3 4
celldm(1)= 5.82603 celldm(2)= 0.00000 celldm(3)= 1.14207
celldm(4)= 0.00000 celldm(5)= 0.00000 celldm(6)= 0.00000
crystal axes: (cart. coord. in units of a_0)
a(1) = ( 1.0000 0.0000 0.0000 )
a(2) = ( -0.5000 0.8660 0.0000 )
a(3) = ( 0.0000 0.0000 1.1421 )
reciprocal axes: (cart. coord. in units 2 pi/a_0)
b(1) = ( 1.0000 0.5774 0.0000 )
b(2) = ( 0.0000 1.1547 0.0000 )
b(3) = ( 0.0000 0.0000 0.8756 )
Atoms inside the unit cell:
Cartesian axes
site n. atom mass positions (a_0 units)
1 Mg 24.3050 tau( 1) = ( 0.00000 0.00000 0.00000 )
2 B 10.8110 tau( 2) = ( -0.00000 0.57735 0.57103 )
3 B 10.8110 tau( 3) = ( 0.50000 0.28868 0.57103 )
25 Sym.Ops. (with q -> -q+G )
G cutoff = 137.5641 ( 6657 G-vectors) FFT grid: ( 24, 24, 27)
number of k points= 216 gaussian broad. (Ry)= 0.0200 ngauss = 1
cart. coord. in units 2pi/a_0
k( 1) = ( 0.0000000 0.0000000 0.0000000), wk = 0.0092593
k( 2) = ( 0.0000000 0.0000000 0.1459339), wk = 0.0092593
k( 3) = ( 0.0000000 0.0000000 0.2918678), wk = 0.0092593
k( 4) = ( 0.0000000 0.0000000 0.4378018), wk = 0.0092593
k( 5) = ( 0.0000000 0.0000000 0.5837357), wk = 0.0092593
k( 6) = ( 0.0000000 0.0000000 0.7296696), wk = 0.0092593
k( 7) = ( 0.0000000 0.1924501 0.0000000), wk = 0.0092593
k( 8) = ( 0.0000000 0.1924501 0.1459339), wk = 0.0092593
k( 9) = ( 0.0000000 0.1924501 0.2918678), wk = 0.0092593
k( 10) = ( 0.0000000 0.1924501 0.4378018), wk = 0.0092593
k( 11) = ( 0.0000000 0.1924501 0.5837357), wk = 0.0092593
k( 12) = ( 0.0000000 0.1924501 0.7296696), wk = 0.0092593
k( 13) = ( 0.0000000 0.3849002 0.0000000), wk = 0.0092593
k( 14) = ( 0.0000000 0.3849002 0.1459339), wk = 0.0092593
k( 15) = ( 0.0000000 0.3849002 0.2918678), wk = 0.0092593
k( 16) = ( 0.0000000 0.3849002 0.4378018), wk = 0.0092593
k( 17) = ( 0.0000000 0.3849002 0.5837357), wk = 0.0092593
k( 18) = ( 0.0000000 0.3849002 0.7296696), wk = 0.0092593
k( 19) = ( 0.0000000 0.5773503 0.0000000), wk = 0.0092593
k( 20) = ( 0.0000000 0.5773503 0.1459339), wk = 0.0092593
k( 21) = ( 0.0000000 0.5773503 0.2918678), wk = 0.0092593
k( 22) = ( 0.0000000 0.5773503 0.4378018), wk = 0.0092593
k( 23) = ( 0.0000000 0.5773503 0.5837357), wk = 0.0092593
k( 24) = ( 0.0000000 0.5773503 0.7296696), wk = 0.0092593
k( 25) = ( 0.0000000 0.7698004 0.0000000), wk = 0.0092593
k( 26) = ( 0.0000000 0.7698004 0.1459339), wk = 0.0092593
k( 27) = ( 0.0000000 0.7698004 0.2918678), wk = 0.0092593
k( 28) = ( 0.0000000 0.7698004 0.4378018), wk = 0.0092593
k( 29) = ( 0.0000000 0.7698004 0.5837357), wk = 0.0092593
k( 30) = ( 0.0000000 0.7698004 0.7296696), wk = 0.0092593
k( 31) = ( 0.0000000 0.9622504 0.0000000), wk = 0.0092593
k( 32) = ( 0.0000000 0.9622504 0.1459339), wk = 0.0092593
k( 33) = ( 0.0000000 0.9622504 0.2918678), wk = 0.0092593
k( 34) = ( 0.0000000 0.9622504 0.4378018), wk = 0.0092593
k( 35) = ( 0.0000000 0.9622504 0.5837357), wk = 0.0092593
k( 36) = ( 0.0000000 0.9622504 0.7296696), wk = 0.0092593
k( 37) = ( 0.1666667 0.0962250 0.0000000), wk = 0.0092593
k( 38) = ( 0.1666667 0.0962250 0.1459339), wk = 0.0092593
k( 39) = ( 0.1666667 0.0962250 0.2918678), wk = 0.0092593
k( 40) = ( 0.1666667 0.0962250 0.4378018), wk = 0.0092593
k( 41) = ( 0.1666667 0.0962250 0.5837357), wk = 0.0092593
k( 42) = ( 0.1666667 0.0962250 0.7296696), wk = 0.0092593
k( 43) = ( 0.1666667 0.2886751 0.0000000), wk = 0.0092593
k( 44) = ( 0.1666667 0.2886751 0.1459339), wk = 0.0092593
k( 45) = ( 0.1666667 0.2886751 0.2918678), wk = 0.0092593
k( 46) = ( 0.1666667 0.2886751 0.4378018), wk = 0.0092593
k( 47) = ( 0.1666667 0.2886751 0.5837357), wk = 0.0092593
k( 48) = ( 0.1666667 0.2886751 0.7296696), wk = 0.0092593
k( 49) = ( 0.1666667 0.4811252 0.0000000), wk = 0.0092593
k( 50) = ( 0.1666667 0.4811252 0.1459339), wk = 0.0092593
k( 51) = ( 0.1666667 0.4811252 0.2918678), wk = 0.0092593
k( 52) = ( 0.1666667 0.4811252 0.4378018), wk = 0.0092593
k( 53) = ( 0.1666667 0.4811252 0.5837357), wk = 0.0092593
k( 54) = ( 0.1666667 0.4811252 0.7296696), wk = 0.0092593
k( 55) = ( 0.1666667 0.6735753 0.0000000), wk = 0.0092593
k( 56) = ( 0.1666667 0.6735753 0.1459339), wk = 0.0092593
k( 57) = ( 0.1666667 0.6735753 0.2918678), wk = 0.0092593
k( 58) = ( 0.1666667 0.6735753 0.4378018), wk = 0.0092593
k( 59) = ( 0.1666667 0.6735753 0.5837357), wk = 0.0092593
k( 60) = ( 0.1666667 0.6735753 0.7296696), wk = 0.0092593
k( 61) = ( 0.1666667 0.8660254 0.0000000), wk = 0.0092593
k( 62) = ( 0.1666667 0.8660254 0.1459339), wk = 0.0092593
k( 63) = ( 0.1666667 0.8660254 0.2918678), wk = 0.0092593
k( 64) = ( 0.1666667 0.8660254 0.4378018), wk = 0.0092593
k( 65) = ( 0.1666667 0.8660254 0.5837357), wk = 0.0092593
k( 66) = ( 0.1666667 0.8660254 0.7296696), wk = 0.0092593
k( 67) = ( 0.1666667 1.0584755 0.0000000), wk = 0.0092593
k( 68) = ( 0.1666667 1.0584755 0.1459339), wk = 0.0092593
k( 69) = ( 0.1666667 1.0584755 0.2918678), wk = 0.0092593
k( 70) = ( 0.1666667 1.0584755 0.4378018), wk = 0.0092593
k( 71) = ( 0.1666667 1.0584755 0.5837357), wk = 0.0092593
k( 72) = ( 0.1666667 1.0584755 0.7296696), wk = 0.0092593
k( 73) = ( 0.3333333 0.1924501 0.0000000), wk = 0.0092593
k( 74) = ( 0.3333333 0.1924501 0.1459339), wk = 0.0092593
k( 75) = ( 0.3333333 0.1924501 0.2918678), wk = 0.0092593
k( 76) = ( 0.3333333 0.1924501 0.4378018), wk = 0.0092593
k( 77) = ( 0.3333333 0.1924501 0.5837357), wk = 0.0092593
k( 78) = ( 0.3333333 0.1924501 0.7296696), wk = 0.0092593
k( 79) = ( 0.3333333 0.3849002 0.0000000), wk = 0.0092593
k( 80) = ( 0.3333333 0.3849002 0.1459339), wk = 0.0092593
k( 81) = ( 0.3333333 0.3849002 0.2918678), wk = 0.0092593
k( 82) = ( 0.3333333 0.3849002 0.4378018), wk = 0.0092593
k( 83) = ( 0.3333333 0.3849002 0.5837357), wk = 0.0092593
k( 84) = ( 0.3333333 0.3849002 0.7296696), wk = 0.0092593
k( 85) = ( 0.3333333 0.5773503 0.0000000), wk = 0.0092593
k( 86) = ( 0.3333333 0.5773503 0.1459339), wk = 0.0092593
k( 87) = ( 0.3333333 0.5773503 0.2918678), wk = 0.0092593
k( 88) = ( 0.3333333 0.5773503 0.4378018), wk = 0.0092593
k( 89) = ( 0.3333333 0.5773503 0.5837357), wk = 0.0092593
k( 90) = ( 0.3333333 0.5773503 0.7296696), wk = 0.0092593
k( 91) = ( 0.3333333 0.7698004 0.0000000), wk = 0.0092593
k( 92) = ( 0.3333333 0.7698004 0.1459339), wk = 0.0092593
k( 93) = ( 0.3333333 0.7698004 0.2918678), wk = 0.0092593
k( 94) = ( 0.3333333 0.7698004 0.4378018), wk = 0.0092593
k( 95) = ( 0.3333333 0.7698004 0.5837357), wk = 0.0092593
k( 96) = ( 0.3333333 0.7698004 0.7296696), wk = 0.0092593
k( 97) = ( 0.3333333 0.9622505 0.0000000), wk = 0.0092593
k( 98) = ( 0.3333333 0.9622505 0.1459339), wk = 0.0092593
k( 99) = ( 0.3333333 0.9622505 0.2918678), wk = 0.0092593
k( 100) = ( 0.3333333 0.9622505 0.4378018), wk = 0.0092593
k( 101) = ( 0.3333333 0.9622505 0.5837357), wk = 0.0092593
k( 102) = ( 0.3333333 0.9622505 0.7296696), wk = 0.0092593
k( 103) = ( 0.3333333 1.1547005 0.0000000), wk = 0.0092593
k( 104) = ( 0.3333333 1.1547005 0.1459339), wk = 0.0092593
k( 105) = ( 0.3333333 1.1547005 0.2918678), wk = 0.0092593
k( 106) = ( 0.3333333 1.1547005 0.4378018), wk = 0.0092593
k( 107) = ( 0.3333333 1.1547005 0.5837357), wk = 0.0092593
k( 108) = ( 0.3333333 1.1547005 0.7296696), wk = 0.0092593
k( 109) = ( 0.5000000 0.2886751 0.0000000), wk = 0.0092593
k( 110) = ( 0.5000000 0.2886751 0.1459339), wk = 0.0092593
k( 111) = ( 0.5000000 0.2886751 0.2918678), wk = 0.0092593
k( 112) = ( 0.5000000 0.2886751 0.4378018), wk = 0.0092593
k( 113) = ( 0.5000000 0.2886751 0.5837357), wk = 0.0092593
k( 114) = ( 0.5000000 0.2886751 0.7296696), wk = 0.0092593
k( 115) = ( 0.5000000 0.4811252 0.0000000), wk = 0.0092593
k( 116) = ( 0.5000000 0.4811252 0.1459339), wk = 0.0092593
k( 117) = ( 0.5000000 0.4811252 0.2918678), wk = 0.0092593
k( 118) = ( 0.5000000 0.4811252 0.4378018), wk = 0.0092593
k( 119) = ( 0.5000000 0.4811252 0.5837357), wk = 0.0092593
k( 120) = ( 0.5000000 0.4811252 0.7296696), wk = 0.0092593
k( 121) = ( 0.5000000 0.6735753 0.0000000), wk = 0.0092593
k( 122) = ( 0.5000000 0.6735753 0.1459339), wk = 0.0092593
k( 123) = ( 0.5000000 0.6735753 0.2918678), wk = 0.0092593
k( 124) = ( 0.5000000 0.6735753 0.4378018), wk = 0.0092593
k( 125) = ( 0.5000000 0.6735753 0.5837357), wk = 0.0092593
k( 126) = ( 0.5000000 0.6735753 0.7296696), wk = 0.0092593
k( 127) = ( 0.5000000 0.8660254 0.0000000), wk = 0.0092593
k( 128) = ( 0.5000000 0.8660254 0.1459339), wk = 0.0092593
k( 129) = ( 0.5000000 0.8660254 0.2918678), wk = 0.0092593
k( 130) = ( 0.5000000 0.8660254 0.4378018), wk = 0.0092593
k( 131) = ( 0.5000000 0.8660254 0.5837357), wk = 0.0092593
k( 132) = ( 0.5000000 0.8660254 0.7296696), wk = 0.0092593
k( 133) = ( 0.5000000 1.0584755 0.0000000), wk = 0.0092593
k( 134) = ( 0.5000000 1.0584755 0.1459339), wk = 0.0092593
k( 135) = ( 0.5000000 1.0584755 0.2918678), wk = 0.0092593
k( 136) = ( 0.5000000 1.0584755 0.4378018), wk = 0.0092593
k( 137) = ( 0.5000000 1.0584755 0.5837357), wk = 0.0092593
k( 138) = ( 0.5000000 1.0584755 0.7296696), wk = 0.0092593
k( 139) = ( 0.5000000 1.2509256 0.0000000), wk = 0.0092593
k( 140) = ( 0.5000000 1.2509256 0.1459339), wk = 0.0092593
k( 141) = ( 0.5000000 1.2509256 0.2918678), wk = 0.0092593
k( 142) = ( 0.5000000 1.2509256 0.4378018), wk = 0.0092593
k( 143) = ( 0.5000000 1.2509256 0.5837357), wk = 0.0092593
k( 144) = ( 0.5000000 1.2509256 0.7296696), wk = 0.0092593
k( 145) = ( 0.6666667 0.3849002 0.0000000), wk = 0.0092593
k( 146) = ( 0.6666667 0.3849002 0.1459339), wk = 0.0092593
k( 147) = ( 0.6666667 0.3849002 0.2918678), wk = 0.0092593
k( 148) = ( 0.6666667 0.3849002 0.4378018), wk = 0.0092593
k( 149) = ( 0.6666667 0.3849002 0.5837357), wk = 0.0092593
k( 150) = ( 0.6666667 0.3849002 0.7296696), wk = 0.0092593
k( 151) = ( 0.6666667 0.5773503 0.0000000), wk = 0.0092593
k( 152) = ( 0.6666667 0.5773503 0.1459339), wk = 0.0092593
k( 153) = ( 0.6666667 0.5773503 0.2918678), wk = 0.0092593
k( 154) = ( 0.6666667 0.5773503 0.4378018), wk = 0.0092593
k( 155) = ( 0.6666667 0.5773503 0.5837357), wk = 0.0092593
k( 156) = ( 0.6666667 0.5773503 0.7296696), wk = 0.0092593
k( 157) = ( 0.6666667 0.7698004 0.0000000), wk = 0.0092593
k( 158) = ( 0.6666667 0.7698004 0.1459339), wk = 0.0092593
k( 159) = ( 0.6666667 0.7698004 0.2918678), wk = 0.0092593
k( 160) = ( 0.6666667 0.7698004 0.4378018), wk = 0.0092593
k( 161) = ( 0.6666667 0.7698004 0.5837357), wk = 0.0092593
k( 162) = ( 0.6666667 0.7698004 0.7296696), wk = 0.0092593
k( 163) = ( 0.6666667 0.9622505 0.0000000), wk = 0.0092593
k( 164) = ( 0.6666667 0.9622505 0.1459339), wk = 0.0092593
k( 165) = ( 0.6666667 0.9622505 0.2918678), wk = 0.0092593
k( 166) = ( 0.6666667 0.9622505 0.4378018), wk = 0.0092593
k( 167) = ( 0.6666667 0.9622505 0.5837357), wk = 0.0092593
k( 168) = ( 0.6666667 0.9622505 0.7296696), wk = 0.0092593
k( 169) = ( 0.6666667 1.1547005 0.0000000), wk = 0.0092593
k( 170) = ( 0.6666667 1.1547005 0.1459339), wk = 0.0092593
k( 171) = ( 0.6666667 1.1547005 0.2918678), wk = 0.0092593
k( 172) = ( 0.6666667 1.1547005 0.4378018), wk = 0.0092593
k( 173) = ( 0.6666667 1.1547005 0.5837357), wk = 0.0092593
k( 174) = ( 0.6666667 1.1547005 0.7296696), wk = 0.0092593
k( 175) = ( 0.6666667 1.3471506 0.0000000), wk = 0.0092593
k( 176) = ( 0.6666667 1.3471506 0.1459339), wk = 0.0092593
k( 177) = ( 0.6666667 1.3471506 0.2918678), wk = 0.0092593
k( 178) = ( 0.6666667 1.3471506 0.4378018), wk = 0.0092593
k( 179) = ( 0.6666667 1.3471506 0.5837357), wk = 0.0092593
k( 180) = ( 0.6666667 1.3471506 0.7296696), wk = 0.0092593
k( 181) = ( 0.8333333 0.4811252 0.0000000), wk = 0.0092593
k( 182) = ( 0.8333333 0.4811252 0.1459339), wk = 0.0092593
k( 183) = ( 0.8333333 0.4811252 0.2918678), wk = 0.0092593
k( 184) = ( 0.8333333 0.4811252 0.4378018), wk = 0.0092593
k( 185) = ( 0.8333333 0.4811252 0.5837357), wk = 0.0092593
k( 186) = ( 0.8333333 0.4811252 0.7296696), wk = 0.0092593
k( 187) = ( 0.8333333 0.6735753 0.0000000), wk = 0.0092593
k( 188) = ( 0.8333333 0.6735753 0.1459339), wk = 0.0092593
k( 189) = ( 0.8333333 0.6735753 0.2918678), wk = 0.0092593
k( 190) = ( 0.8333333 0.6735753 0.4378018), wk = 0.0092593
k( 191) = ( 0.8333333 0.6735753 0.5837357), wk = 0.0092593
k( 192) = ( 0.8333333 0.6735753 0.7296696), wk = 0.0092593
k( 193) = ( 0.8333333 0.8660254 0.0000000), wk = 0.0092593
k( 194) = ( 0.8333333 0.8660254 0.1459339), wk = 0.0092593
k( 195) = ( 0.8333333 0.8660254 0.2918678), wk = 0.0092593
k( 196) = ( 0.8333333 0.8660254 0.4378018), wk = 0.0092593
k( 197) = ( 0.8333333 0.8660254 0.5837357), wk = 0.0092593
k( 198) = ( 0.8333333 0.8660254 0.7296696), wk = 0.0092593
k( 199) = ( 0.8333333 1.0584755 0.0000000), wk = 0.0092593
k( 200) = ( 0.8333333 1.0584755 0.1459339), wk = 0.0092593
k( 201) = ( 0.8333333 1.0584755 0.2918678), wk = 0.0092593
k( 202) = ( 0.8333333 1.0584755 0.4378018), wk = 0.0092593
k( 203) = ( 0.8333333 1.0584755 0.5837357), wk = 0.0092593
k( 204) = ( 0.8333333 1.0584755 0.7296696), wk = 0.0092593
k( 205) = ( 0.8333333 1.2509256 0.0000000), wk = 0.0092593
k( 206) = ( 0.8333333 1.2509256 0.1459339), wk = 0.0092593
k( 207) = ( 0.8333333 1.2509256 0.2918678), wk = 0.0092593
k( 208) = ( 0.8333333 1.2509256 0.4378018), wk = 0.0092593
k( 209) = ( 0.8333333 1.2509256 0.5837357), wk = 0.0092593
k( 210) = ( 0.8333333 1.2509256 0.7296696), wk = 0.0092593
k( 211) = ( 0.8333333 1.4433757 0.0000000), wk = 0.0092593
k( 212) = ( 0.8333333 1.4433757 0.1459339), wk = 0.0092593
k( 213) = ( 0.8333333 1.4433757 0.2918678), wk = 0.0092593
k( 214) = ( 0.8333333 1.4433757 0.4378018), wk = 0.0092593
k( 215) = ( 0.8333333 1.4433757 0.5837357), wk = 0.0092593
k( 216) = ( 0.8333333 1.4433757 0.7296696), wk = 0.0092593
PseudoPot. # 1 for Mg read from file:
../pp/Mg.pz-n-vbc.UPF
MD5 check sum: 51ac066f8f4bf7da60c51ce0af5caf3d
Pseudo is Norm-conserving + core correction, Zval = 2.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 171 points, 2 beta functions with:
l(1) = 0
l(2) = 1
PseudoPot. # 2 for B read from file:
../pp/B.pz-vbc.UPF
MD5 check sum: b59596b5d63edeea6a2b3a0beace49c5
Pseudo is Norm-conserving, Zval = 3.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 157 points, 1 beta functions with:
l(1) = 0
EPW : 4.05s CPU 8.79s WALL
EPW : 4.10s CPU 8.85s WALL
No wavefunction gauge setting applied
-------------------------------------------------------------------
Wannierization on 6 x 6 x 6 electronic grid
-------------------------------------------------------------------
Spin CASE ( default = unpolarized )
Initializing Wannier90
Initial Wannier projections
( 0.33333 0.66667 0.50000) : l = 1 mr = 1
( 0.66667 0.33333 0.50000) : l = 1 mr = 1
( 0.50000 1.00000 0.50000) : l = 0 mr = 1
( 0.00000 0.50000 0.50000) : l = 0 mr = 1
( 0.50000 0.50000 0.50000) : l = 0 mr = 1
- Number of bands is ( 8)
- Number of total bands is ( 8)
- Number of excluded bands is ( 0)
- Number of wannier functions is ( 5)
- All guiding functions are given
Reading data about k-point neighbours
- All neighbours are found
AMN
k points = 216 in 24 pools
1 of 9 on ionode
2 of 9 on ionode
3 of 9 on ionode
4 of 9 on ionode
5 of 9 on ionode
6 of 9 on ionode
7 of 9 on ionode
8 of 9 on ionode
9 of 9 on ionode
AMN calculated
MMN
k points = 216 in 24 pools
1 of 9 on ionode
2 of 9 on ionode
3 of 9 on ionode
4 of 9 on ionode
5 of 9 on ionode
6 of 9 on ionode
7 of 9 on ionode
8 of 9 on ionode
9 of 9 on ionode
MMN calculated
Running Wannier90
Wannier Function centers (cartesian, alat) and spreads (ang):
( -0.00000 0.57735 0.44675) : 2.34403
( 0.50000 0.28868 0.44675) : 2.34403
( -0.00000 0.86603 0.64520) : 1.24172
( -0.25000 0.43301 0.64520) : 1.24172
( 0.25000 0.43301 0.64520) : 1.24172
-------------------------------------------------------------------
WANNIER : 6.31s CPU 12.81s WALL ( 1 calls)
-------------------------------------------------------------------
Dipole matrix elements calculated
Calculating kgmap
Progress kgmap: ########################################
kmaps : 2.58s CPU 3.36s WALL ( 1 calls)
Symmetries of Bravais lattice: 24
Symmetries of crystal: 24
########################################################################################################################
# WARNING: there are pending errors
# PENDING ERROR (ierr=1)
# ERROR IN: iotk_open_read (iotk_files.f90:611)
# CVS Revision: 1.20
# unit
file=../phonons/save/MgB2.phsave/patterns.1.xml
binary=F
iostat=29
# FROM IOTK LIBRARY, VERSION 1.2.0
# UNRECOVERABLE ERROR (ierr=2)
# ERROR IN: iotk_getline (iotk_scan.f90:947)
# CVS Revision: 1.23
#
iostat=29
# ERROR IN: iotk_scan_tag (iotk_scan.f90:593)
# CVS Revision: 1.23
# ERROR IN: iotk_scan (iotk_scan.f90:821)
# CVS Revision: 1.23
# ERROR IN: iotk_scan_begin (iotk_scan.f90:98)
# CVS Revision: 1.23
########################################################################################################################
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
In: PMI_Abort(1, application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0)
slurmstepd: error: *** STEP 1917963.1 ON iris-001 CANCELLED AT 2020-07-11T10:29:18 ***
srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
srun: error: iris-001: task 0: Exited with exit code 1
srun: error: iris-002: tasks 12-23: Killed
srun: error: iris-001: tasks 1-11: Killed
Please suggest me how can I sort out this error.
Thanks and regards
Sandeep
I was trying to calculate the electron-phonon coupling constant for MgB2 but I got a warning and error during the calculations of EPW. However, in all cases I used same nodes in scf, nscf and epw calculations (srun -n 24 epw.x -npool 24 -inp epw.in | tee epw.out). Below are the details of output and errors during epw calculations:
``:oss/
`.+s+. .+ys--yh+ `./ss+.
-sh//yy+` +yy +yy -+h+-oyy
-yh- .oyy/.-sh. .syo-.:sy- /yh
`.-.` `yh+ -oyyyo. `/syys: oys `.`
`/+ssys+-` `sh+ ` oys` .:osyo`
-yh- ./syyooyo` .sys+/oyo--yh/
`yy+ .-:-. `-/+/:` -sh-
/yh. oys
``..---hho---------` .---------..` `.-----.` -hd+---.
`./osmNMMMMMMMMMMMMMMMs. +NNMMMMMMMMNNmh+. yNMMMMMNm- oNMMMMMNmo++:`
+sy--/sdMMMhyyyyyyyNMMh- .oyNMMmyyyyyhNMMm+` -yMMMdyyo:` .oyyNMMNhs+syy`
-yy/ /MMM+.`-+/``mMMy- `mMMh:`````.dMMN:` `MMMy-`-dhhy```mMMy:``+hs
-yy+` /MMMo:-mMM+`-oo/. mMMh: `dMMN/` dMMm:`dMMMMy..MMMo-.+yo`
.sys`/MMMMNNMMMs- mMMmyooooymMMNo: oMMM/sMMMMMM++MMN//oh:
`sh+/MMMhyyMMMs- `-` mMMMMMMMMMNmy+-` -MMMhMMMsmMMmdMMd/yy+
`-/+++oyy-/MMM+.`/hh/.`mNm:` mMMd+/////:-.` NMMMMMd/:NMMMMMy:/yyo/:.`
+os+//:-..-oMMMo:--:::-/MMMo. .-mMMd+---` hMMMMN+. oMMMMMo. `-+osyso:`
syo `mNMMMMMNNNNNNNNMMMo.oNNMMMMMNNNN:` +MMMMs:` dMMMN/` ``:syo
/yh` :syyyyyyyyyyyyyyyy+.`+syyyyyyyyo:` .oyys:` .oyys:` +yh
-yh- ```````````````` ````````` `` `` oys
-+h/------------------------::::::::://////++++++++++++++++++++++///////::::/yd:
shdddddddddddddddddddddddddddddhhhhhhhhyyyyyssssssssssssssssyyyyyyyhhhhhhhddddh`
S. Ponce, E. R. Margine, C. Verdi, and F. Giustino,
Comput. Phys. Commun. 209, 116 (2016)
Program EPW v.5.1.0 starts on 11Jul2020 at 10:28:51
This program is part of the open-source Quantum ESPRESSO suite
for quantum simulation of materials; please cite
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009);
"P. Giannozzi et al., J. Phys.:Condens. Matter 29 465901 (2017);
URL http://www.quantum-espresso.org",
in publications or presentations arising from this work. More details at
http://www.quantum-espresso.org/quote
Parallel version (MPI & OpenMP), running on 24 processor cores
Number of MPI processes: 24
Threads/MPI process: 1
MPI processes distributed on 2 nodes
K-points division: npool = 24
Reading data from directory:
./MgB2.save/
IMPORTANT: XC functional enforced from input :
Exchange-correlation = PZ ( 1 1 0 0 0 0)
Using LIBXC version = 4 3 4
Any further DFT definition will be discarded
Please, verify this is what you really want
G-vector sticks info
--------------------
sticks: dense smooth PW G-vecs: dense smooth PW
Sum 379 379 163 6657 6657 1907
--
bravais-lattice index = 4
lattice parameter (a_0) = 5.8260 a.u.
unit-cell volume = 195.5871 (a.u.)^3
number of atoms/cell = 3
number of atomic types = 2
kinetic-energy cut-off = 40.0000 Ry
charge density cut-off = 160.0000 Ry
Exchange-correlation = PZ ( 1 1 0 0 0 0)
Using LIBXC version = 4 3 4
celldm(1)= 5.82603 celldm(2)= 0.00000 celldm(3)= 1.14207
celldm(4)= 0.00000 celldm(5)= 0.00000 celldm(6)= 0.00000
crystal axes: (cart. coord. in units of a_0)
a(1) = ( 1.0000 0.0000 0.0000 )
a(2) = ( -0.5000 0.8660 0.0000 )
a(3) = ( 0.0000 0.0000 1.1421 )
reciprocal axes: (cart. coord. in units 2 pi/a_0)
b(1) = ( 1.0000 0.5774 0.0000 )
b(2) = ( 0.0000 1.1547 0.0000 )
b(3) = ( 0.0000 0.0000 0.8756 )
Atoms inside the unit cell:
Cartesian axes
site n. atom mass positions (a_0 units)
1 Mg 24.3050 tau( 1) = ( 0.00000 0.00000 0.00000 )
2 B 10.8110 tau( 2) = ( -0.00000 0.57735 0.57103 )
3 B 10.8110 tau( 3) = ( 0.50000 0.28868 0.57103 )
25 Sym.Ops. (with q -> -q+G )
G cutoff = 137.5641 ( 6657 G-vectors) FFT grid: ( 24, 24, 27)
number of k points= 216 gaussian broad. (Ry)= 0.0200 ngauss = 1
cart. coord. in units 2pi/a_0
k( 1) = ( 0.0000000 0.0000000 0.0000000), wk = 0.0092593
k( 2) = ( 0.0000000 0.0000000 0.1459339), wk = 0.0092593
k( 3) = ( 0.0000000 0.0000000 0.2918678), wk = 0.0092593
k( 4) = ( 0.0000000 0.0000000 0.4378018), wk = 0.0092593
k( 5) = ( 0.0000000 0.0000000 0.5837357), wk = 0.0092593
k( 6) = ( 0.0000000 0.0000000 0.7296696), wk = 0.0092593
k( 7) = ( 0.0000000 0.1924501 0.0000000), wk = 0.0092593
k( 8) = ( 0.0000000 0.1924501 0.1459339), wk = 0.0092593
k( 9) = ( 0.0000000 0.1924501 0.2918678), wk = 0.0092593
k( 10) = ( 0.0000000 0.1924501 0.4378018), wk = 0.0092593
k( 11) = ( 0.0000000 0.1924501 0.5837357), wk = 0.0092593
k( 12) = ( 0.0000000 0.1924501 0.7296696), wk = 0.0092593
k( 13) = ( 0.0000000 0.3849002 0.0000000), wk = 0.0092593
k( 14) = ( 0.0000000 0.3849002 0.1459339), wk = 0.0092593
k( 15) = ( 0.0000000 0.3849002 0.2918678), wk = 0.0092593
k( 16) = ( 0.0000000 0.3849002 0.4378018), wk = 0.0092593
k( 17) = ( 0.0000000 0.3849002 0.5837357), wk = 0.0092593
k( 18) = ( 0.0000000 0.3849002 0.7296696), wk = 0.0092593
k( 19) = ( 0.0000000 0.5773503 0.0000000), wk = 0.0092593
k( 20) = ( 0.0000000 0.5773503 0.1459339), wk = 0.0092593
k( 21) = ( 0.0000000 0.5773503 0.2918678), wk = 0.0092593
k( 22) = ( 0.0000000 0.5773503 0.4378018), wk = 0.0092593
k( 23) = ( 0.0000000 0.5773503 0.5837357), wk = 0.0092593
k( 24) = ( 0.0000000 0.5773503 0.7296696), wk = 0.0092593
k( 25) = ( 0.0000000 0.7698004 0.0000000), wk = 0.0092593
k( 26) = ( 0.0000000 0.7698004 0.1459339), wk = 0.0092593
k( 27) = ( 0.0000000 0.7698004 0.2918678), wk = 0.0092593
k( 28) = ( 0.0000000 0.7698004 0.4378018), wk = 0.0092593
k( 29) = ( 0.0000000 0.7698004 0.5837357), wk = 0.0092593
k( 30) = ( 0.0000000 0.7698004 0.7296696), wk = 0.0092593
k( 31) = ( 0.0000000 0.9622504 0.0000000), wk = 0.0092593
k( 32) = ( 0.0000000 0.9622504 0.1459339), wk = 0.0092593
k( 33) = ( 0.0000000 0.9622504 0.2918678), wk = 0.0092593
k( 34) = ( 0.0000000 0.9622504 0.4378018), wk = 0.0092593
k( 35) = ( 0.0000000 0.9622504 0.5837357), wk = 0.0092593
k( 36) = ( 0.0000000 0.9622504 0.7296696), wk = 0.0092593
k( 37) = ( 0.1666667 0.0962250 0.0000000), wk = 0.0092593
k( 38) = ( 0.1666667 0.0962250 0.1459339), wk = 0.0092593
k( 39) = ( 0.1666667 0.0962250 0.2918678), wk = 0.0092593
k( 40) = ( 0.1666667 0.0962250 0.4378018), wk = 0.0092593
k( 41) = ( 0.1666667 0.0962250 0.5837357), wk = 0.0092593
k( 42) = ( 0.1666667 0.0962250 0.7296696), wk = 0.0092593
k( 43) = ( 0.1666667 0.2886751 0.0000000), wk = 0.0092593
k( 44) = ( 0.1666667 0.2886751 0.1459339), wk = 0.0092593
k( 45) = ( 0.1666667 0.2886751 0.2918678), wk = 0.0092593
k( 46) = ( 0.1666667 0.2886751 0.4378018), wk = 0.0092593
k( 47) = ( 0.1666667 0.2886751 0.5837357), wk = 0.0092593
k( 48) = ( 0.1666667 0.2886751 0.7296696), wk = 0.0092593
k( 49) = ( 0.1666667 0.4811252 0.0000000), wk = 0.0092593
k( 50) = ( 0.1666667 0.4811252 0.1459339), wk = 0.0092593
k( 51) = ( 0.1666667 0.4811252 0.2918678), wk = 0.0092593
k( 52) = ( 0.1666667 0.4811252 0.4378018), wk = 0.0092593
k( 53) = ( 0.1666667 0.4811252 0.5837357), wk = 0.0092593
k( 54) = ( 0.1666667 0.4811252 0.7296696), wk = 0.0092593
k( 55) = ( 0.1666667 0.6735753 0.0000000), wk = 0.0092593
k( 56) = ( 0.1666667 0.6735753 0.1459339), wk = 0.0092593
k( 57) = ( 0.1666667 0.6735753 0.2918678), wk = 0.0092593
k( 58) = ( 0.1666667 0.6735753 0.4378018), wk = 0.0092593
k( 59) = ( 0.1666667 0.6735753 0.5837357), wk = 0.0092593
k( 60) = ( 0.1666667 0.6735753 0.7296696), wk = 0.0092593
k( 61) = ( 0.1666667 0.8660254 0.0000000), wk = 0.0092593
k( 62) = ( 0.1666667 0.8660254 0.1459339), wk = 0.0092593
k( 63) = ( 0.1666667 0.8660254 0.2918678), wk = 0.0092593
k( 64) = ( 0.1666667 0.8660254 0.4378018), wk = 0.0092593
k( 65) = ( 0.1666667 0.8660254 0.5837357), wk = 0.0092593
k( 66) = ( 0.1666667 0.8660254 0.7296696), wk = 0.0092593
k( 67) = ( 0.1666667 1.0584755 0.0000000), wk = 0.0092593
k( 68) = ( 0.1666667 1.0584755 0.1459339), wk = 0.0092593
k( 69) = ( 0.1666667 1.0584755 0.2918678), wk = 0.0092593
k( 70) = ( 0.1666667 1.0584755 0.4378018), wk = 0.0092593
k( 71) = ( 0.1666667 1.0584755 0.5837357), wk = 0.0092593
k( 72) = ( 0.1666667 1.0584755 0.7296696), wk = 0.0092593
k( 73) = ( 0.3333333 0.1924501 0.0000000), wk = 0.0092593
k( 74) = ( 0.3333333 0.1924501 0.1459339), wk = 0.0092593
k( 75) = ( 0.3333333 0.1924501 0.2918678), wk = 0.0092593
k( 76) = ( 0.3333333 0.1924501 0.4378018), wk = 0.0092593
k( 77) = ( 0.3333333 0.1924501 0.5837357), wk = 0.0092593
k( 78) = ( 0.3333333 0.1924501 0.7296696), wk = 0.0092593
k( 79) = ( 0.3333333 0.3849002 0.0000000), wk = 0.0092593
k( 80) = ( 0.3333333 0.3849002 0.1459339), wk = 0.0092593
k( 81) = ( 0.3333333 0.3849002 0.2918678), wk = 0.0092593
k( 82) = ( 0.3333333 0.3849002 0.4378018), wk = 0.0092593
k( 83) = ( 0.3333333 0.3849002 0.5837357), wk = 0.0092593
k( 84) = ( 0.3333333 0.3849002 0.7296696), wk = 0.0092593
k( 85) = ( 0.3333333 0.5773503 0.0000000), wk = 0.0092593
k( 86) = ( 0.3333333 0.5773503 0.1459339), wk = 0.0092593
k( 87) = ( 0.3333333 0.5773503 0.2918678), wk = 0.0092593
k( 88) = ( 0.3333333 0.5773503 0.4378018), wk = 0.0092593
k( 89) = ( 0.3333333 0.5773503 0.5837357), wk = 0.0092593
k( 90) = ( 0.3333333 0.5773503 0.7296696), wk = 0.0092593
k( 91) = ( 0.3333333 0.7698004 0.0000000), wk = 0.0092593
k( 92) = ( 0.3333333 0.7698004 0.1459339), wk = 0.0092593
k( 93) = ( 0.3333333 0.7698004 0.2918678), wk = 0.0092593
k( 94) = ( 0.3333333 0.7698004 0.4378018), wk = 0.0092593
k( 95) = ( 0.3333333 0.7698004 0.5837357), wk = 0.0092593
k( 96) = ( 0.3333333 0.7698004 0.7296696), wk = 0.0092593
k( 97) = ( 0.3333333 0.9622505 0.0000000), wk = 0.0092593
k( 98) = ( 0.3333333 0.9622505 0.1459339), wk = 0.0092593
k( 99) = ( 0.3333333 0.9622505 0.2918678), wk = 0.0092593
k( 100) = ( 0.3333333 0.9622505 0.4378018), wk = 0.0092593
k( 101) = ( 0.3333333 0.9622505 0.5837357), wk = 0.0092593
k( 102) = ( 0.3333333 0.9622505 0.7296696), wk = 0.0092593
k( 103) = ( 0.3333333 1.1547005 0.0000000), wk = 0.0092593
k( 104) = ( 0.3333333 1.1547005 0.1459339), wk = 0.0092593
k( 105) = ( 0.3333333 1.1547005 0.2918678), wk = 0.0092593
k( 106) = ( 0.3333333 1.1547005 0.4378018), wk = 0.0092593
k( 107) = ( 0.3333333 1.1547005 0.5837357), wk = 0.0092593
k( 108) = ( 0.3333333 1.1547005 0.7296696), wk = 0.0092593
k( 109) = ( 0.5000000 0.2886751 0.0000000), wk = 0.0092593
k( 110) = ( 0.5000000 0.2886751 0.1459339), wk = 0.0092593
k( 111) = ( 0.5000000 0.2886751 0.2918678), wk = 0.0092593
k( 112) = ( 0.5000000 0.2886751 0.4378018), wk = 0.0092593
k( 113) = ( 0.5000000 0.2886751 0.5837357), wk = 0.0092593
k( 114) = ( 0.5000000 0.2886751 0.7296696), wk = 0.0092593
k( 115) = ( 0.5000000 0.4811252 0.0000000), wk = 0.0092593
k( 116) = ( 0.5000000 0.4811252 0.1459339), wk = 0.0092593
k( 117) = ( 0.5000000 0.4811252 0.2918678), wk = 0.0092593
k( 118) = ( 0.5000000 0.4811252 0.4378018), wk = 0.0092593
k( 119) = ( 0.5000000 0.4811252 0.5837357), wk = 0.0092593
k( 120) = ( 0.5000000 0.4811252 0.7296696), wk = 0.0092593
k( 121) = ( 0.5000000 0.6735753 0.0000000), wk = 0.0092593
k( 122) = ( 0.5000000 0.6735753 0.1459339), wk = 0.0092593
k( 123) = ( 0.5000000 0.6735753 0.2918678), wk = 0.0092593
k( 124) = ( 0.5000000 0.6735753 0.4378018), wk = 0.0092593
k( 125) = ( 0.5000000 0.6735753 0.5837357), wk = 0.0092593
k( 126) = ( 0.5000000 0.6735753 0.7296696), wk = 0.0092593
k( 127) = ( 0.5000000 0.8660254 0.0000000), wk = 0.0092593
k( 128) = ( 0.5000000 0.8660254 0.1459339), wk = 0.0092593
k( 129) = ( 0.5000000 0.8660254 0.2918678), wk = 0.0092593
k( 130) = ( 0.5000000 0.8660254 0.4378018), wk = 0.0092593
k( 131) = ( 0.5000000 0.8660254 0.5837357), wk = 0.0092593
k( 132) = ( 0.5000000 0.8660254 0.7296696), wk = 0.0092593
k( 133) = ( 0.5000000 1.0584755 0.0000000), wk = 0.0092593
k( 134) = ( 0.5000000 1.0584755 0.1459339), wk = 0.0092593
k( 135) = ( 0.5000000 1.0584755 0.2918678), wk = 0.0092593
k( 136) = ( 0.5000000 1.0584755 0.4378018), wk = 0.0092593
k( 137) = ( 0.5000000 1.0584755 0.5837357), wk = 0.0092593
k( 138) = ( 0.5000000 1.0584755 0.7296696), wk = 0.0092593
k( 139) = ( 0.5000000 1.2509256 0.0000000), wk = 0.0092593
k( 140) = ( 0.5000000 1.2509256 0.1459339), wk = 0.0092593
k( 141) = ( 0.5000000 1.2509256 0.2918678), wk = 0.0092593
k( 142) = ( 0.5000000 1.2509256 0.4378018), wk = 0.0092593
k( 143) = ( 0.5000000 1.2509256 0.5837357), wk = 0.0092593
k( 144) = ( 0.5000000 1.2509256 0.7296696), wk = 0.0092593
k( 145) = ( 0.6666667 0.3849002 0.0000000), wk = 0.0092593
k( 146) = ( 0.6666667 0.3849002 0.1459339), wk = 0.0092593
k( 147) = ( 0.6666667 0.3849002 0.2918678), wk = 0.0092593
k( 148) = ( 0.6666667 0.3849002 0.4378018), wk = 0.0092593
k( 149) = ( 0.6666667 0.3849002 0.5837357), wk = 0.0092593
k( 150) = ( 0.6666667 0.3849002 0.7296696), wk = 0.0092593
k( 151) = ( 0.6666667 0.5773503 0.0000000), wk = 0.0092593
k( 152) = ( 0.6666667 0.5773503 0.1459339), wk = 0.0092593
k( 153) = ( 0.6666667 0.5773503 0.2918678), wk = 0.0092593
k( 154) = ( 0.6666667 0.5773503 0.4378018), wk = 0.0092593
k( 155) = ( 0.6666667 0.5773503 0.5837357), wk = 0.0092593
k( 156) = ( 0.6666667 0.5773503 0.7296696), wk = 0.0092593
k( 157) = ( 0.6666667 0.7698004 0.0000000), wk = 0.0092593
k( 158) = ( 0.6666667 0.7698004 0.1459339), wk = 0.0092593
k( 159) = ( 0.6666667 0.7698004 0.2918678), wk = 0.0092593
k( 160) = ( 0.6666667 0.7698004 0.4378018), wk = 0.0092593
k( 161) = ( 0.6666667 0.7698004 0.5837357), wk = 0.0092593
k( 162) = ( 0.6666667 0.7698004 0.7296696), wk = 0.0092593
k( 163) = ( 0.6666667 0.9622505 0.0000000), wk = 0.0092593
k( 164) = ( 0.6666667 0.9622505 0.1459339), wk = 0.0092593
k( 165) = ( 0.6666667 0.9622505 0.2918678), wk = 0.0092593
k( 166) = ( 0.6666667 0.9622505 0.4378018), wk = 0.0092593
k( 167) = ( 0.6666667 0.9622505 0.5837357), wk = 0.0092593
k( 168) = ( 0.6666667 0.9622505 0.7296696), wk = 0.0092593
k( 169) = ( 0.6666667 1.1547005 0.0000000), wk = 0.0092593
k( 170) = ( 0.6666667 1.1547005 0.1459339), wk = 0.0092593
k( 171) = ( 0.6666667 1.1547005 0.2918678), wk = 0.0092593
k( 172) = ( 0.6666667 1.1547005 0.4378018), wk = 0.0092593
k( 173) = ( 0.6666667 1.1547005 0.5837357), wk = 0.0092593
k( 174) = ( 0.6666667 1.1547005 0.7296696), wk = 0.0092593
k( 175) = ( 0.6666667 1.3471506 0.0000000), wk = 0.0092593
k( 176) = ( 0.6666667 1.3471506 0.1459339), wk = 0.0092593
k( 177) = ( 0.6666667 1.3471506 0.2918678), wk = 0.0092593
k( 178) = ( 0.6666667 1.3471506 0.4378018), wk = 0.0092593
k( 179) = ( 0.6666667 1.3471506 0.5837357), wk = 0.0092593
k( 180) = ( 0.6666667 1.3471506 0.7296696), wk = 0.0092593
k( 181) = ( 0.8333333 0.4811252 0.0000000), wk = 0.0092593
k( 182) = ( 0.8333333 0.4811252 0.1459339), wk = 0.0092593
k( 183) = ( 0.8333333 0.4811252 0.2918678), wk = 0.0092593
k( 184) = ( 0.8333333 0.4811252 0.4378018), wk = 0.0092593
k( 185) = ( 0.8333333 0.4811252 0.5837357), wk = 0.0092593
k( 186) = ( 0.8333333 0.4811252 0.7296696), wk = 0.0092593
k( 187) = ( 0.8333333 0.6735753 0.0000000), wk = 0.0092593
k( 188) = ( 0.8333333 0.6735753 0.1459339), wk = 0.0092593
k( 189) = ( 0.8333333 0.6735753 0.2918678), wk = 0.0092593
k( 190) = ( 0.8333333 0.6735753 0.4378018), wk = 0.0092593
k( 191) = ( 0.8333333 0.6735753 0.5837357), wk = 0.0092593
k( 192) = ( 0.8333333 0.6735753 0.7296696), wk = 0.0092593
k( 193) = ( 0.8333333 0.8660254 0.0000000), wk = 0.0092593
k( 194) = ( 0.8333333 0.8660254 0.1459339), wk = 0.0092593
k( 195) = ( 0.8333333 0.8660254 0.2918678), wk = 0.0092593
k( 196) = ( 0.8333333 0.8660254 0.4378018), wk = 0.0092593
k( 197) = ( 0.8333333 0.8660254 0.5837357), wk = 0.0092593
k( 198) = ( 0.8333333 0.8660254 0.7296696), wk = 0.0092593
k( 199) = ( 0.8333333 1.0584755 0.0000000), wk = 0.0092593
k( 200) = ( 0.8333333 1.0584755 0.1459339), wk = 0.0092593
k( 201) = ( 0.8333333 1.0584755 0.2918678), wk = 0.0092593
k( 202) = ( 0.8333333 1.0584755 0.4378018), wk = 0.0092593
k( 203) = ( 0.8333333 1.0584755 0.5837357), wk = 0.0092593
k( 204) = ( 0.8333333 1.0584755 0.7296696), wk = 0.0092593
k( 205) = ( 0.8333333 1.2509256 0.0000000), wk = 0.0092593
k( 206) = ( 0.8333333 1.2509256 0.1459339), wk = 0.0092593
k( 207) = ( 0.8333333 1.2509256 0.2918678), wk = 0.0092593
k( 208) = ( 0.8333333 1.2509256 0.4378018), wk = 0.0092593
k( 209) = ( 0.8333333 1.2509256 0.5837357), wk = 0.0092593
k( 210) = ( 0.8333333 1.2509256 0.7296696), wk = 0.0092593
k( 211) = ( 0.8333333 1.4433757 0.0000000), wk = 0.0092593
k( 212) = ( 0.8333333 1.4433757 0.1459339), wk = 0.0092593
k( 213) = ( 0.8333333 1.4433757 0.2918678), wk = 0.0092593
k( 214) = ( 0.8333333 1.4433757 0.4378018), wk = 0.0092593
k( 215) = ( 0.8333333 1.4433757 0.5837357), wk = 0.0092593
k( 216) = ( 0.8333333 1.4433757 0.7296696), wk = 0.0092593
PseudoPot. # 1 for Mg read from file:
../pp/Mg.pz-n-vbc.UPF
MD5 check sum: 51ac066f8f4bf7da60c51ce0af5caf3d
Pseudo is Norm-conserving + core correction, Zval = 2.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 171 points, 2 beta functions with:
l(1) = 0
l(2) = 1
PseudoPot. # 2 for B read from file:
../pp/B.pz-vbc.UPF
MD5 check sum: b59596b5d63edeea6a2b3a0beace49c5
Pseudo is Norm-conserving, Zval = 3.0
Generated by new atomic code, or converted to UPF format
Using radial grid of 157 points, 1 beta functions with:
l(1) = 0
EPW : 4.05s CPU 8.79s WALL
EPW : 4.10s CPU 8.85s WALL
No wavefunction gauge setting applied
-------------------------------------------------------------------
Wannierization on 6 x 6 x 6 electronic grid
-------------------------------------------------------------------
Spin CASE ( default = unpolarized )
Initializing Wannier90
Initial Wannier projections
( 0.33333 0.66667 0.50000) : l = 1 mr = 1
( 0.66667 0.33333 0.50000) : l = 1 mr = 1
( 0.50000 1.00000 0.50000) : l = 0 mr = 1
( 0.00000 0.50000 0.50000) : l = 0 mr = 1
( 0.50000 0.50000 0.50000) : l = 0 mr = 1
- Number of bands is ( 8)
- Number of total bands is ( 8)
- Number of excluded bands is ( 0)
- Number of wannier functions is ( 5)
- All guiding functions are given
Reading data about k-point neighbours
- All neighbours are found
AMN
k points = 216 in 24 pools
1 of 9 on ionode
2 of 9 on ionode
3 of 9 on ionode
4 of 9 on ionode
5 of 9 on ionode
6 of 9 on ionode
7 of 9 on ionode
8 of 9 on ionode
9 of 9 on ionode
AMN calculated
MMN
k points = 216 in 24 pools
1 of 9 on ionode
2 of 9 on ionode
3 of 9 on ionode
4 of 9 on ionode
5 of 9 on ionode
6 of 9 on ionode
7 of 9 on ionode
8 of 9 on ionode
9 of 9 on ionode
MMN calculated
Running Wannier90
Wannier Function centers (cartesian, alat) and spreads (ang):
( -0.00000 0.57735 0.44675) : 2.34403
( 0.50000 0.28868 0.44675) : 2.34403
( -0.00000 0.86603 0.64520) : 1.24172
( -0.25000 0.43301 0.64520) : 1.24172
( 0.25000 0.43301 0.64520) : 1.24172
-------------------------------------------------------------------
WANNIER : 6.31s CPU 12.81s WALL ( 1 calls)
-------------------------------------------------------------------
Dipole matrix elements calculated
Calculating kgmap
Progress kgmap: ########################################
kmaps : 2.58s CPU 3.36s WALL ( 1 calls)
Symmetries of Bravais lattice: 24
Symmetries of crystal: 24
########################################################################################################################
# WARNING: there are pending errors
# PENDING ERROR (ierr=1)
# ERROR IN: iotk_open_read (iotk_files.f90:611)
# CVS Revision: 1.20
# unit
file=../phonons/save/MgB2.phsave/patterns.1.xml
binary=F
iostat=29
# FROM IOTK LIBRARY, VERSION 1.2.0
# UNRECOVERABLE ERROR (ierr=2)
# ERROR IN: iotk_getline (iotk_scan.f90:947)
# CVS Revision: 1.23
#
iostat=29
# ERROR IN: iotk_scan_tag (iotk_scan.f90:593)
# CVS Revision: 1.23
# ERROR IN: iotk_scan (iotk_scan.f90:821)
# CVS Revision: 1.23
# ERROR IN: iotk_scan_begin (iotk_scan.f90:98)
# CVS Revision: 1.23
########################################################################################################################
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
In: PMI_Abort(1, application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0)
slurmstepd: error: *** STEP 1917963.1 ON iris-001 CANCELLED AT 2020-07-11T10:29:18 ***
srun: Job step aborted: Waiting up to 32 seconds for job step to finish.
srun: error: iris-001: task 0: Exited with exit code 1
srun: error: iris-002: tasks 12-23: Killed
srun: error: iris-001: tasks 1-11: Killed
Please suggest me how can I sort out this error.
Thanks and regards
Sandeep